C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000012_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075539-ENSDARG00000012513 CGP 7955 23:16802135-16852904
GeneTranscriptPositionBiotype
ENSDARG00000012513 (sdcbp2)
syndecan binding protein (syntenin) 2 		ENSDART00000020810 (sdcbp2-001) 16819339-16852904 protein_coding
ENSDART00000136496 (sdcbp2-002) 16822802-16837358 protein_coding
ENSDARG00000075539 (snphb)
syntaphilin b 		ENSDART00000109537 (snphb-201) 16802135-16812899 protein_coding
ENSDART00000143545 (snphb-001) 16809357-16811557 protein_coding
CIL_000012_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101298-ENSG00000125775 CGP 9606 20:1266316-1329239
GeneTranscriptPositionBiotype
ENSG00000101298 (SNPH)
syntaphilin 		ENST00000381867 (SNPH-001) 1266355-1309328 protein_coding
ENST00000381873 (SNPH-002) 1266316-1309328 protein_coding
ENST00000614659 (SNPH-201) 1295774-1309325 protein_coding
ENSG00000125775 (SDCBP2)
syndecan binding protein (syntenin) 2 		ENST00000339987 (SDCBP2-004) 1309975-1325869 protein_coding
ENST00000360779 (SDCBP2-003) 1309975-1329239 protein_coding
ENST00000381808 (SDCBP2-002) 1309975-1313639 protein_coding
ENST00000381812 (SDCBP2-001) 1309909-1325707 protein_coding
ENST00000467129 (SDCBP2-005) 1310298-1311081 retained_intron
ENST00000615838 (SDCBP2-006) 1312702-1329139 retained_intron
ENSG00000280162 (RP11-314N13.9)
 ENST00000624378 (RP11-314N13.9-001) 1320710-1324367 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000012_0001ENSDARG00000012513ENSDART00000020810ENSDART00000136496ENSDARG00000075539ENSDART00000109537ENSDART00000143545CIL_000012_0002ENSG00000101298ENST00000381867ENST00000381873ENST00000614659ENSG00000125775ENST00000339987ENST00000360779ENST00000381808ENST00000381812ENST00000467129ENST00000615838ENSG00000280162ENST00000624378
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000012_0001ENSDARG00000012513ENSDART00000020810ENSDART00000136496ENSDARG00000075539ENSDART00000109537ENSDART00000143545CIL_000012_0002ENSG00000101298ENST00000381867ENST00000381873ENST00000614659ENSG00000125775ENST00000339987ENST00000381808ENSG00000280162ENST00000624378
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012513 ENSDART00000020810 N/A N/A N/A 31.198±22.95 N/A N/A 28.582±8.78 16.858±6.28 5.156±0.00 N/A 18.442±0.00 N/A N/A N/A
ENSDART00000136496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.560±0.00 N/A N/A N/A
ENSDARG00000075539 ENSDART00000109537 N/A N/A N/A N/A N/A N/A 0.065±0.01 0.084±0.00 N/A N/A 0.816±0.00 N/A N/A N/A
ENSDART00000143545 N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101298 ENST00000381867 N/A N/A N/A 0.642±0.00 N/A N/A 0.473±0.00 N/A N/A 0.259±0.00 N/A N/A N/A N/A
ENST00000381873 0.678±0.00 0.734±0.00 0.167±0.00 10.302±0.00 1.209±0.79 1.541±1.26 1.667±0.00 0.839±0.81 0.262±0.15 0.463±0.07 0.759±0.00 1.537±1.79 0.502±0.19 3.047±0.00
ENST00000614659 N/A 0.510±0.00 N/A 4.824±2.30 N/A N/A 0.477±0.18 N/A N/A N/A 0.176±0.00 0.814±0.03 0.156±0.00 N/A
ENSG00000125775 ENST00000339987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.199±0.00 N/A N/A
ENST00000360779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 54.335±0.00 N/A N/A
ENST00000381812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280162 ENST00000624378 0.081±0.00 0.084±0.00 0.083±0.00 0.124±0.08 0.317±0.27 0.320±0.31 0.030±0.00 0.082±0.05 0.527±0.50 0.169±0.06 N/A 0.230±0.28 N/A 0.133±0.08

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