C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: claudin 5b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000014059 cldn5b 7955 + 10:45496611-45498257 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000020610 cldn5b-201 45496611-45498255 protein_coding
  ENSDART00000138242 cldn5b-001 45496611-45498257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000020610ENSDART00000138242
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000020610 2.529±1.39 15.758±10.73 4.658±2.41 0.870±0.00 34.303±0.00
ENSDART00000138242 0.973±0.00 16.525±12.25 5.946±2.63 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RL CIL_0000RL_0001 CGP 10:45432943-45498257

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005886 IEA plasma membrane
GO:0005923 IEA tight junction
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030054 IEA cell junction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000184113 CLDN5 claudin 5 protein_coding Homo_sapiens
ENSMUSG00000041378 Cldn5 claudin 5 protein_coding Mus_musculus

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