C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PDZ and LIM domain 3b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000014248 pdlim3b 7955 - 14:30652299-30669733 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000005568 pdlim3b-001 30652299-30669733 protein_coding
  ENSDART00000133775 pdlim3b-002 30654918-30669622 processed_transcript
  ENSDART00000147111 pdlim3b-003 30652517-30653336 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleENSDART00000005568ENSDART00000133775
Transcript ID Brain Heart Muscle
ENSDART00000005568 0.888±0.09 8.103±0.00 3.601±0.00
ENSDART00000133775 0.502±0.00 N/A 1.882±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H0 CIL_0000H0_0002 CGP 14:30652299-30775591

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000154553 PDLIM3 PDZ and LIM domain 3 protein_coding Homo_sapiens
ENSMUSG00000031636 Pdlim3 PDZ and LIM domain 3 protein_coding Mus_musculus

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