C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 53, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000016156 fam53b 7955 + 12:47985031-48039202 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000008312 fam53b-001 47985031-48039202 protein_coding
  ENSDART00000134428 fam53b-003 48016617-48039192 processed_transcript
  ENSDART00000135393 fam53b-002 47985090-48039201 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000008312ENSDART00000134428ENSDART00000135393
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000008312 2.460±0.41 21.141±13.68 4.802±0.00 1.830±0.00 6.951±0.00
ENSDART00000134428 5.940±5.73 38.814±0.00 19.652±16.02 N/A N/A
ENSDART00000135393 0.474±0.01 N/A 22.636±6.07 N/A 1.108±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0031101 IMP fin regeneration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000189319 FAM53B family with sequence similarity 53, member B protein_coding Homo_sapiens
ENSMUSG00000030956 Fam53b family with sequence similarity 53, member B protein_coding Mus_musculus

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