C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 8A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000016516 rbm8a 7955 + 16:48986238-48994140 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000018253 rbm8a-001 48986238-48994140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000018253
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000018253 37.657±35.87 46.370±31.22 50.172±27.40 8.005±0.00 17.744±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000184 IEA nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 ISS regulation of alternative mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006396 IEA RNA processing
GO:0006397 IEA mRNA processing
GO:0006417 IEA regulation of translation
GO:0006810 IEA transport
GO:0008380 IEA RNA splicing
GO:0016607 IEA nuclear speck
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000265241 RBM8A RNA binding motif protein 8A protein_coding Homo_sapiens
ENSMUSG00000038374 Rbm8a RNA binding motif protein 8a protein_coding Mus_musculus
ENSMUSG00000078184 B020018G12Rik RIKEN cDNA B020018G12 gene protein_coding Mus_musculus

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