C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: brevican
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000016736 bcan 7955 - 16:31538333-31581156 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000047499 bcan-201 31539795-31581156 protein_coding
  ENSDART00000148476 bcan-001 31538333-31562860 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000047499ENSDART00000148476
Transcript ID Brain Heart Kidney
ENSDART00000047499 4.829±0.67 N/A 0.093±0.00
ENSDART00000148476 20.146±3.83 0.220±0.24 0.457±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CX CIL_0000CX_0001 CGP 16:31532159-31581156

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005540 IEA hyaluronic acid binding
GO:0007155 IEA cell adhesion
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132692 BCAN brevican protein_coding Homo_sapiens
ENSMUSG00000004892 Bcan brevican protein_coding Mus_musculus

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