C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Tnf receptor-associated factor 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000017240 traf5 7955 + 22:41260579-41281962 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000040550 traf5-201 41263926-41281962 protein_coding
  ENSDART00000137339 traf5-001 41260579-41276573 protein_coding

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000040550ENSDART00000137339
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000040550 0.359±0.28 0.949±0.17 0.325±0.00 0.035±0.00 0.448±0.00
ENSDART00000137339 0.035±0.00 0.235±0.00 N/A 0.087±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein ligase activity
GO:0005515 IEA protein binding
GO:0007165 IEA signal transduction
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0042981 IEA regulation of apoptotic process
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000082512 TRAF5 TNF receptor-associated factor 5 protein_coding Homo_sapiens
ENSMUSG00000026637 Traf5 TNF receptor-associated factor 5 protein_coding Mus_musculus

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