C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin protein ligase E3 component n-recognin 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000018192 ubr5 7955 - 16:56147791-56252683 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000035761 ubr5-201 56147792-56252546 protein_coding
  ENSDART00000111869 ubr5-004 56237202-56252681 protein_coding
  ENSDART00000128437 ubr5-202 56147792-56252546 protein_coding
  ENSDART00000134444 ubr5-001 56147791-56252683 protein_coding
  ENSDART00000141985 ubr5-003 56159952-56165117 protein_coding
  ENSDART00000143273 ubr5-002 56162785-56168665 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000035761ENSDART00000128437ENSDART00000134444ENSDART00000143273
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000035761 N/A 1.604±1.71 N/A 0.932±0.00 0.728±0.00
ENSDART00000128437 7.891±0.00 0.466±0.25 N/A 1.144±0.00 1.125±0.00
ENSDART00000134444 2.563±0.63 1.668±0.45 3.377±0.00 1.057±0.00 1.651±0.00
ENSDART00000143273 1.743±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0004842 IEA ubiquitin-protein ligase activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0043130 IEA ubiquitin binding
GO:0050847 IBA progesterone receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000104517 UBR5 ubiquitin protein ligase E3 component n-recognin 5 protein_coding Homo_sapiens
ENSMUSG00000037487 Ubr5 ubiquitin protein ligase E3 component n-recognin 5 protein_coding Mus_musculus

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