C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SR-related CTD-associated factor 4b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000018854 scaf4b 7955 + 15:40812895-40874461 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000099234 scaf4b-001 40812895-40844594 non_stop_decay
  ENSDART00000129218 scaf4b-003 40840123-40844592 retained_intron
  ENSDART00000130404 scaf4b-002 40812971-40814478 retained_intron
  ENSDART00000152731 scaf4b-004 40812895-40874461 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000099234ENSDART00000130404ENSDART00000152731
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000099234 7.700±2.07 5.333±0.00 3.203±0.00 1.088±0.00 1.984±0.00
ENSDART00000130404 N/A 0.226±0.00 0.144±0.10 N/A N/A
ENSDART00000152731 4.601±2.23 3.609±3.24 0.975±0.79 1.596±0.00 2.142±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000213079 SCAF8 SR-related CTD-associated factor 8 protein_coding Homo_sapiens
ENSMUSG00000046201 Scaf8 SR-related CTD-associated factor 8 protein_coding Mus_musculus

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