| Transcript ID | Brain | Heart | Kidney |
|---|---|---|---|
| ENSDART00000126544 | 0.693±0.22 | 0.051±0.00 | 0.177±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | LIM homeobox transcription factor 1, beta a | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSDARG00000019306  |
lmx1ba | 7955 | - |
5:5004954-5120938  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENSDART00000013921 |
lmx1ba-001 | 5007620-5007804 | protein_coding | ||
| ENSDART00000126544 |
lmx1ba-201 | 5004954-5120938 | protein_coding | ||
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002XT | CIL_0002XT_0001 | CGP | 5:4893213-5120938 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0002072 | IGI | optic cup morphogenesis involved in camera-type eye development |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IEA | nucleus |
| GO:0006355 | IEA | regulation of transcription, DNA-dependent |
| GO:0008270 | IEA | zinc ion binding |
| GO:0021592 | IMP | fourth ventricle development |
| GO:0030902 | IMP | hindbrain development |
| GO:0030917 | IGI | midbrain-hindbrain boundary development |
| GO:0043565 | IEA | sequence-specific DNA binding |
| GO:0046872 | IEA | metal ion binding |
| GO:0060041 | IGI | retina development in camera-type eye |
| GO:0061386 | IGI | closure of optic fissure |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSG00000136944
|
LMX1B | LIM homeobox transcription factor 1, beta | protein_coding | Homo_sapiens | |
|
ENSMUSG00000038765
|
Lmx1b | LIM homeobox transcription factor 1 beta | protein_coding | Mus_musculus | |
