C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: forkhead box D3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000021032 foxd3 7955 - 6:31784202-31786000 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000017695 foxd3-001 31784202-31786000 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENSDART00000017695
Transcript ID Heart Muscle
ENSDART00000017695 0.044±0.00 4.414±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KW CIL_0007KW_0003 UCNEbase 6:31747696-31976014

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IBA negative regulation of transcription from RNA polymerase II promoter
GO:0001658 IBA branching involved in ureteric bud morphogenesis
GO:0001755 IMP neural crest cell migration
GO:0001822 IBA kidney development
GO:0003677 IEA DNA binding
GO:0003690 IBA double-stranded DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003705 IBA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005667 IBA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0007389 IBA pattern specification process
GO:0007422 IMP peripheral nervous system development
GO:0008134 IBA transcription factor binding
GO:0008301 IBA DNA binding, bending
GO:0009790 IBA embryo development
GO:0010629 IGI negative regulation of gene expression
GO:0014032 IGI neural crest cell development
GO:0030318 IGI melanocyte differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-dependent
GO:0045944 IBA positive regulation of transcription from RNA polymerase II promoter
GO:0048484 IMP enteric nervous system development
GO:0048485 IMP sympathetic nervous system development
GO:0048846 IBA axon extension involved in axon guidance
GO:0048937 IMP lateral line nerve glial cell development
GO:0050931 IGI pigment cell differentiation
GO:0050935 IMP iridophore differentiation
GO:0051090 IBA regulation of sequence-specific DNA binding transcription factor activity
GO:0051216 IMP cartilage development
GO:0060351 IMP cartilage development involved in endochondral bone morphogenesis

Homologs

No Homologs available.

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