C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sine oculis homeobox homolog 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000026473 six1b 7955 + 20:20572029-20578078 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000036124 six1b-001 20572029-20578078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000036124
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000036124 0.049±0.02 0.028±0.01 0.088±0.03 0.014±0.00 6.431±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002074 IMP extraocular skeletal muscle development
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006915 IEA apoptotic process
GO:0007275 IEA multicellular organismal development
GO:0021984 IGI adenohypophysis development
GO:0043282 IMP pharyngeal muscle development
GO:0043565 IEA sequence-specific DNA binding
GO:0048839 IMP inner ear development
GO:0048935 IMP peripheral nervous system neuron development
GO:0051146 IMP striated muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000126778 SIX1 SIX homeobox 1 protein_coding Homo_sapiens
ENSMUSG00000051367 Six1 sine oculis-related homeobox 1 protein_coding Mus_musculus

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