C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small nuclear RNA activating complex, polypeptide 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000029569 snapc1a 7955 - 20:20386734-20396952 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000042376 snapc1a-001 20386734-20396952 protein_coding
  ENSDART00000152382 snapc1a-003 20390983-20396729 nonsense_mediated_decay
  ENSDART00000152795 snapc1a-002 20391281-20396863 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverENSDART00000042376ENSDART00000152382
Transcript ID Brain Kidney Liver
ENSDART00000042376 0.372±0.01 9.299±0.00 0.217±0.00
ENSDART00000152382 0.274±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000023608 SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa protein_coding Homo_sapiens
ENSMUSG00000021113 Snapc1 small nuclear RNA activating complex, polypeptide 1 protein_coding Mus_musculus

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