C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small nuclear RNA activating complex, polypeptide 1, 43kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000023608 SNAPC1 9606 + 14:61762357-61796428 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216294 SNAPC1-001 61762357-61796428 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaTestisENST00000216294
Transcript ID Muscle Ovary Placenta Testis
ENST00000216294 1.784±0.00 7.688±0.00 4.527±0.00 19.249±7.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S0 CIL_0000S0_0001 CGP 14:61695513-61796428
CIL_0000S1 CIL_0000S1_0001 CGP 14:61762357-62112550

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005654 TAS nucleoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0010467 TAS gene expression

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003827 snapc1b small nuclear RNA activating complex, polypeptide 1b protein_coding Danio_rerio
ENSDARG00000029569 snapc1a small nuclear RNA activating complex, polypeptide 1a protein_coding Danio_rerio
ENSMUSG00000021113 Snapc1 small nuclear RNA activating complex, polypeptide 1 protein_coding Mus_musculus

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