C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RCD1 required for cell differentiation1 homolog (S. pombe)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000033855 rqcd1 7955 - 22:12890844-12902643 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000047464 rqcd1-201 12890844-12902605 protein_coding
  ENSDART00000143574 rqcd1-001 12891579-12902643 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000143574
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000143574 9.127±5.79 8.815±5.56 7.262±3.53 1.577±0.00 9.116±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000932 IEA cytoplasmic mRNA processing body
GO:0005488 IEA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006417 IEA regulation of translation
GO:0030014 ISS CCR4-NOT complex
GO:0031047 IEA gene silencing by RNA
GO:0033147 ISS negative regulation of intracellular estrogen receptor signaling pathway
GO:2000327 ISS positive regulation of ligand-dependent nuclear receptor transcription coactivator activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000144580 RQCD1 RCD1 required for cell differentiation1 homolog (S. pombe) protein_coding Homo_sapiens
ENSMUSG00000026174 Rqcd1 rcd1 (required for cell differentiation) homolog 1 (S. pombe) protein_coding Mus_musculus

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