C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleoporin like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000033965 nupl1 7955 - 24:25616159-25638191 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000019350 nupl1-001 25616159-25638191 protein_coding
  ENSDART00000122997 nupl1-201 25616161-25637873 protein_coding
  ENSDART00000126395 nupl1-004 25626657-25638121 protein_coding
  ENSDART00000135757 nupl1-002 25631373-25634047 retained_intron
  ENSDART00000144336 nupl1-003 25616265-25631971 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000019350ENSDART00000122997ENSDART00000126395ENSDART00000144336
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000019350 3.608±0.42 1.708±1.17 3.894±0.00 0.798±0.00 0.361±0.00
ENSDART00000122997 1.694±0.49 2.849±0.01 6.194±4.18 1.114±0.00 0.547±0.00
ENSDART00000126395 1.460±0.00 N/A 0.929±0.00 0.542±0.00 0.370±0.00
ENSDART00000144336 2.573±0.46 2.908±0.00 N/A N/A 0.780±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RX CIL_0000RX_0001 CGP 24:25616159-25667487

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005643 IEA nuclear pore
GO:0006913 IEA nucleocytoplasmic transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000139496 NUPL1 nucleoporin like 1 protein_coding Homo_sapiens
ENSMUSG00000063895 Nupl1 nucleoporin like 1 protein_coding Mus_musculus

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