C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleoporin like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139496 NUPL1 9606 + 13:25301524-25349800 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000381718 NUPL1-007 25301633-25340718 protein_coding
  ENST00000381736 NUPL1-001 25301524-25342416 protein_coding
  ENST00000381747 NUPL1-009 25301647-25336309 protein_coding
  ENST00000394327 NUPL1-004 25307822-25336344 protein_coding
  ENST00000460326 NUPL1-013 25301625-25309429 retained_intron
  ENST00000463407 NUPL1-005 25301631-25336340 protein_coding
  ENST00000465068 NUPL1-014 25301625-25312942 nonsense_mediated_decay
  ENST00000466694 NUPL1-002 25301631-25338878 processed_transcript
  ENST00000476553 NUPL1-015 25320273-25325054 retained_intron
  ENST00000477876 NUPL1-003 25331433-25349800 processed_transcript
  ENST00000480187 NUPL1-012 25301625-25308137 retained_intron
  ENST00000481980 NUPL1-010 25301556-25307949 nonsense_mediated_decay
  ENST00000490231 NUPL1-011 25301625-25312956 nonsense_mediated_decay
  ENST00000495460 NUPL1-006 25301645-25317823 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381718ENST00000381736ENST00000381747ENST00000463407ENST00000495460
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381718 N/A N/A 0.759±0.00 2.449±0.00 2.136±0.00 2.536±0.00 0.810±0.00 N/A N/A N/A 1.144±0.00 N/A N/A N/A
ENST00000381736 3.143±0.00 2.216±0.00 0.480±0.00 1.889±0.00 2.364±0.27 1.979±1.05 2.174±1.22 3.743±2.65 2.237±0.00 4.806±0.62 0.528±0.00 5.397±1.84 3.940±0.20 13.905±0.73
ENST00000381747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.995±0.00 N/A 2.131±0.00 16.926±0.00
ENST00000463407 0.741±0.00 N/A 0.639±0.00 2.408±0.97 1.338±0.71 1.077±0.38 0.735±0.07 N/A 0.672±0.00 3.897±0.00 0.581±0.42 1.973±1.47 0.522±0.15 1.349±0.25
ENST00000495460 N/A N/A 6.150±0.00 N/A 4.603±0.00 4.081±0.00 2.092±0.00 N/A 7.344±0.00 N/A N/A 15.278±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0005487 IEA nucleocytoplasmic transporter activity
GO:0005515 IPI protein binding
GO:0005635 TAS nuclear envelope
GO:0005643 IEA nuclear pore
GO:0005975 TAS carbohydrate metabolic process
GO:0006913 IEA nucleocytoplasmic transport
GO:0007077 TAS mitotic nuclear envelope disassembly
GO:0008645 TAS hexose transport
GO:0010827 TAS regulation of glucose transport
GO:0015031 IEA protein transport
GO:0015758 TAS glucose transport
GO:0016032 TAS viral process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0044281 TAS small molecule metabolic process
GO:0051028 IEA mRNA transport
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033965 nupl1 nucleoporin like 1 protein_coding Danio_rerio
ENSMUSG00000063895 Nupl1 nucleoporin like 1 protein_coding Mus_musculus

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