C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine/arginine-rich splicing factor 7a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000035325 srsf7a 7955 + 5:38495708-38499307 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000051185 srsf7a-002 38495749-38499307 protein_coding
  ENSDART00000131303 srsf7a-007 38495872-38497665 retained_intron
  ENSDART00000132912 srsf7a-006 38495795-38497345 retained_intron
  ENSDART00000133842 srsf7a-003 38495749-38498891 protein_coding
  ENSDART00000134493 srsf7a-011 38496023-38498720 protein_coding
  ENSDART00000135776 srsf7a-001 38495708-38499307 protein_coding
  ENSDART00000136301 srsf7a-005 38495781-38497621 protein_coding
  ENSDART00000141984 srsf7a-004 38495778-38498718 protein_coding
  ENSDART00000142388 srsf7a-008 38495823-38498432 protein_coding
  ENSDART00000147561 srsf7a-009 38495749-38498433 protein_coding
  ENSDART00000147803 srsf7a-010 38495812-38497924 nonsense_mediated_decay
  ENSDART00000151984 srsf7a-013 38497096-38499081 protein_coding
  ENSDART00000152044 srsf7a-012 38495785-38498125 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000051185ENSDART00000133842ENSDART00000135776ENSDART00000142388ENSDART00000152044
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000051185 24.797±8.35 15.035±11.47 15.560±4.33 6.651±0.00 19.885±0.00
ENSDART00000133842 N/A N/A N/A 2.379±0.00 N/A
ENSDART00000135776 7.477±0.00 5.154±0.00 7.834±0.00 N/A N/A
ENSDART00000142388 N/A 16.023±0.00 N/A 3.480±0.00 N/A
ENSDART00000152044 N/A 3.018±0.00 3.682±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000115875 SRSF7 serine/arginine-rich splicing factor 7 protein_coding Homo_sapiens
ENSMUSG00000024097 Srsf7 serine/arginine-rich splicing factor 7 protein_coding Mus_musculus

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