C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: caudal type homeo box transcription factor 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000036292 cdx4 7955 - 14:33816791-33820242 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000052709 cdx4-201 33817324-33820231 protein_coding
  ENSDART00000114973 cdx4-001 33816791-33820242 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000052709ENSDART00000114973
Transcript ID Brain Heart Kidney
ENSDART00000052709 0.218±0.11 N/A 0.188±0.00
ENSDART00000114973 0.071±0.04 0.071±0.00 0.260±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000976 IEA transcription regulatory region sequence-specific DNA binding
GO:0001756 IGI somitogenesis
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0009948 IGI anterior/posterior axis specification
GO:0009952 IMP anterior/posterior pattern specification
GO:0021903 IGI rostrocaudal neural tube patterning
GO:0021906 IMP hindbrain-spinal cord boundary formation
GO:0030097 IGI hemopoiesis
GO:0031016 IGI pancreas development
GO:0043565 IEA sequence-specific DNA binding
GO:0048384 IGI retinoic acid receptor signaling pathway
GO:0048617 IMP embryonic foregut morphogenesis
GO:0048793 IGI pronephros development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000131264 CDX4 caudal type homeobox 4 protein_coding Homo_sapiens
ENSMUSG00000031326 Cdx4 caudal type homeobox 4 protein_coding Mus_musculus

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