C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000037855 taf11 7955 + 23:325279-331653 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000055152 taf11-003 325336-329694 protein_coding
  ENSDART00000134556 taf11-001 325315-331653 protein_coding
  ENSDART00000139738 taf11-002 325279-329535 nonsense_mediated_decay
  ENSDART00000142438 taf11-004 325333-329572 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000055152ENSDART00000134556
Transcript ID Heart Kidney Liver Muscle
ENSDART00000055152 10.241±0.81 7.145±0.00 1.247±0.00 6.868±0.00
ENSDART00000134556 1.931±0.00 N/A 0.250±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006367 IEA transcription initiation from RNA polymerase II promoter
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000064995 TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa protein_coding Homo_sapiens
ENSMUSG00000024218 Taf11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_coding Mus_musculus

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