C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fleer
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000038024 flr 7955 + 3:28982569-29001938 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000055422 flr-001 28982569-29001938 protein_coding
  ENSDART00000108973 flr-002 28982637-29001553 nonsense_mediated_decay
  ENSDART00000151596 flr-003 28993241-28994295 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000055422ENSDART00000108973
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000055422 7.678±1.28 1.679±1.28 2.499±0.00 0.179±0.00 1.476±0.00
ENSDART00000108973 1.147±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001736 IGI establishment of planar polarity
GO:0005215 IMP transporter activity
GO:0005515 IEA protein binding
GO:0005622 IMP intracellular
GO:0005879 IDA axonemal microtubule
GO:0005929 IMP cilium
GO:0007368 IMP determination of left/right symmetry
GO:0018095 IMP protein polyglutamylation
GO:0030030 IEA cell projection organization
GO:0031514 IDA motile cilium
GO:0036372 IGI opsin transport
GO:0042073 IMP intraciliary transport
GO:0042384 IGI cilium assembly
GO:0042995 IEA cell projection
GO:0070738 IMP tubulin-glycine ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196659 TTC30B tetratricopeptide repeat domain 30B protein_coding Homo_sapiens
ENSG00000197557 TTC30A tetratricopeptide repeat domain 30A protein_coding Homo_sapiens
ENSMUSG00000075271 Ttc30a1 tetratricopeptide repeat domain 30A1 protein_coding Mus_musculus
ENSMUSG00000075272 Ttc30a2 tetratricopeptide repeat domain 30A2 protein_coding Mus_musculus
ENSMUSG00000075273 Ttc30b tetratricopeptide repeat domain 30B protein_coding Mus_musculus

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