C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 30B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196659 TTC30B 9606 - 2:177548998-177553014 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000408939 TTC30B-001 177548998-177553014 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000408939
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000408939 0.250±0.00 0.850±0.00 0.534±0.00 0.733±0.13 0.644±0.49 0.551±0.36 0.251±0.00 1.053±0.49 0.449±0.18 0.275±0.07 0.133±0.01 1.095±0.15 0.717±0.14 3.023±1.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017H CIL_00017H_0001 CGP 2:177392644-177553014
CIL_00017I CIL_00017I_0001 CGP 2:177548998-177618966

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005929 IBA cilium
GO:0030992 IBA intraciliary transport particle B
GO:0042073 IBA intraciliary transport
GO:0042384 IBA cilium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038024 flr fleer protein_coding Danio_rerio
ENSMUSG00000075271 Ttc30a1 tetratricopeptide repeat domain 30A1 protein_coding Mus_musculus
ENSMUSG00000075272 Ttc30a2 tetratricopeptide repeat domain 30A2 protein_coding Mus_musculus
ENSMUSG00000075273 Ttc30b tetratricopeptide repeat domain 30B protein_coding Mus_musculus

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