C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PDZ and LIM domain 5a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000038267 pdlim5a 7955 + 5:8559160-8671403 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000099945 pdlim5a-201 8559160-8671403 protein_coding
  ENSDART00000145371 pdlim5a-001 8559160-8622904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000099945ENSDART00000145371
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000099945 0.377±0.12 2.843±0.62 0.559±0.10 0.016±0.00 32.242±0.00
ENSDART00000145371 N/A N/A N/A N/A 51.336±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001S9 CIL_0001S9_0001 CGP 5:8559160-8842843

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163110 PDLIM5 PDZ and LIM domain 5 protein_coding Homo_sapiens
ENSMUSG00000028273 Pdlim5 PDZ and LIM domain 5 protein_coding Mus_musculus

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