C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: achaete-scute complex-like 1a (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000038386 ascl1a 7955 + 4:16485295-16487377 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000056005 ascl1a-001 16485295-16487377 protein_coding

Danio rerio EnsemblZv9

Genome
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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleENSDART00000056005
Transcript ID Brain Heart Muscle
ENSDART00000056005 1.401±0.46 0.030±0.00 0.147±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007I3 CIL_0007I3_0001 CGP 4:16459864-16487377

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000989 ISS transcription factor binding transcription factor activity
GO:0002070 IMP epithelial cell maturation
GO:0003677 IEA DNA binding
GO:0005634 IC nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0007399 IMP nervous system development
GO:0010629 IMP negative regulation of gene expression
GO:0021575 IMP hindbrain morphogenesis
GO:0021984 IMP adenohypophysis development
GO:0030154 IEA cell differentiation
GO:0031099 IGI regeneration
GO:0043565 IPI sequence-specific DNA binding
GO:0043697 IGI cell dedifferentiation
GO:0045666 ISS positive regulation of neuron differentiation
GO:0045893 IDA positive regulation of transcription, DNA-dependent
GO:0046983 IEA protein dimerization activity
GO:0061195 IMP taste bud formation
GO:0061549 IGI sympathetic ganglion development
GO:0070654 IEP sensory epithelium regeneration
GO:2001141 ISS regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000139352 ASCL1 achaete-scute family bHLH transcription factor 1 protein_coding Homo_sapiens
ENSMUSG00000020052 Ascl1 achaete-scute complex homolog 1 (Drosophila) protein_coding Mus_musculus

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