C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: triadin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000041779 trdn 7955 + 20:40176714-40257481 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000061233 trdn-201 40176779-40234120 protein_coding
  ENSDART00000101041 trdn-001 40176748-40257481 protein_coding
  ENSDART00000109681 trdn-003 40176748-40205061 protein_coding
  ENSDART00000121818 trdn-202 40176779-40234166 protein_coding
  ENSDART00000131119 trdn-203 40186105-40229957 protein_coding
  ENSDART00000143680 trdn-002 40176714-40190510 protein_coding
  ENSDART00000153203 trdn-004 40199481-40228775 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000101041ENSDART00000121818ENSDART00000131119ENSDART00000143680
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000101041 0.084±0.02 45.271±0.00 2.019±0.00 N/A N/A
ENSDART00000121818 N/A 53.594±0.00 3.335±0.00 N/A N/A
ENSDART00000131119 0.070±0.00 N/A N/A N/A N/A
ENSDART00000143680 0.208±0.00 N/A N/A 0.128±0.00 25.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067P CIL_00067P_0001 CGP 20:39833547-40257481
CIL_00068A CIL_00068A_0001 CGP 20:40176714-40351621

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016529 IEA sarcoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000186439 TRDN triadin protein_coding Homo_sapiens
ENSMUSG00000019787 Trdn triadin protein_coding Mus_musculus

Loading