C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: matrix metalloproteinase 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000042816 mmp9 7955 + 8:25134455-25148890 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000062845 mmp9-001 25134455-25148890 protein_coding
  ENSDART00000141129 mmp9-002 25136538-25144544 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000062845
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000062845 1.806±0.52 6.607±2.41 46.232±6.38 3.024±0.00 58.481±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002633 IMP positive regulation of granuloma formation
GO:0004222 IEA metalloendopeptidase activity
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0009617 IDA response to bacterium
GO:0016787 IEA hydrolase activity
GO:0031012 IEA extracellular matrix
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100985 MMP9 matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase) protein_coding Homo_sapiens
ENSMUSG00000017737 Mmp9 matrix metallopeptidase 9 protein_coding Mus_musculus

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