C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine palmitoyltransferase, long chain base subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000042995 sptlc1 7955 + 10:5237729-5268562 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000063120 sptlc1-201 5237746-5268555 protein_coding
  ENSDART00000133927 sptlc1-001 5237729-5268562 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000063120ENSDART00000133927
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000063120 1.297±0.32 7.765±2.27 N/A N/A N/A
ENSDART00000133927 5.993±0.37 5.946±1.71 14.245±0.00 1.164±0.00 2.423±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0009058 IEA biosynthetic process
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000090054 SPTLC1 serine palmitoyltransferase, long chain base subunit 1 protein_coding Homo_sapiens
ENSMUSG00000021468 Sptlc1 serine palmitoyltransferase, long chain base subunit 1 protein_coding Mus_musculus

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