C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cryptochrome 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000045768 cry1a 7955 + 4:11077567-11091060 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000034401 cry1a-201 11077732-11091060 protein_coding
  ENSDART00000067281 cry1a-003 11078166-11088921 protein_coding
  ENSDART00000130692 cry1a-002 11077567-11091031 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000034401ENSDART00000130692
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000034401 N/A 0.749±0.10 3.887±1.65 N/A N/A
ENSDART00000130692 27.762±12.35 30.865±5.85 9.565±0.00 1.517±0.00 16.589±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003913 IEA DNA photolyase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IPI transcription factor complex
GO:0006281 IEA DNA repair
GO:0009416 IDA response to light stimulus
GO:0009649 IDA entrainment of circadian clock
GO:0042542 IEP response to hydrogen peroxide
GO:0045892 IDA negative regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000008405 CRY1 cryptochrome circadian clock 1 protein_coding Homo_sapiens
ENSMUSG00000020038 Cry1 cryptochrome 1 (photolyase-like) protein_coding Mus_musculus

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