C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polycomb group ring finger 5b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000052388 pcgf5b 7955 - 12:17477078-17506630 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000086211 pcgf5b-001 17477078-17506630 protein_coding
  ENSDART00000152271 pcgf5b-002 17503296-17506315 processed_transcript
  ENSDART00000152750 pcgf5b-003 17487290-17506318 nonsense_mediated_decay
  ENSDART00000152819 pcgf5b-004 17479788-17488237 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000086211ENSDART00000152750
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000086211 2.163±0.52 2.019±1.16 3.125±0.00 1.689±0.00 0.539±0.00
ENSDART00000152750 N/A N/A N/A 0.873±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0031519 ISS PcG protein complex
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000180628 PCGF5 polycomb group ring finger 5 protein_coding Homo_sapiens
ENSMUSG00000024805 Pcgf5 polycomb group ring finger 5 protein_coding Mus_musculus

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