C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TATA box binding protein (TBP)-associated factor, RNA polymerase I, A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000052471 taf1a 7955 + 20:52152289-52213145 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000074330 taf1a-001 52171887-52213145 protein_coding
  ENSDART00000127444 taf1a-002 52152289-52213145 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENSDART00000074330
Transcript ID Kidney
ENSDART00000074330 14.320±4.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MU CIL_0005MU_0001 CGP 20:52039490-52286030
CIL_0005MT CIL_0005MT_0001 CGP 20:52069511-52286030
CIL_0002TE CIL_0002TE_0001 CGP 20:52097283-52213145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000120 IEA RNA polymerase I transcription factor complex
GO:0006360 IEA transcription from RNA polymerase I promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000143498 TAF1A TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa protein_coding Homo_sapiens
ENSMUSG00000072258 Taf1a TATA box binding protein (Tbp)-associated factor, RNA polymerase I, A protein_coding Mus_musculus

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