C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ferredoxin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000056410 fdx1 7955 + 9:30554004-30568761 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000078904 fdx1-005 30554093-30560325 nonsense_mediated_decay
  ENSDART00000144430 fdx1-002 30554004-30560329 protein_coding
  ENSDART00000147450 fdx1-001 30554050-30560329 nonsense_mediated_decay
  ENSDART00000149927 fdx1-004 30554151-30566953 nonsense_mediated_decay
  ENSDART00000150164 fdx1-003 30554093-30568761 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000078904ENSDART00000144430ENSDART00000147450
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000078904 N/A 14.913±5.67 16.599±0.00 3.559±0.00 2.605±0.00
ENSDART00000144430 21.257±16.34 31.946±15.48 40.691±15.42 0.974±0.00 7.658±0.00
ENSDART00000147450 N/A 15.727±12.94 17.287±9.85 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C3 CIL_0002C3_0001 CGP 9:30554004-30578028

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0009055 IEA electron carrier activity
GO:0046872 IEA metal ion binding
GO:0051536 IEA iron-sulfur cluster binding
GO:0051537 IEA 2 iron, 2 sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000137714 FDX1 ferredoxin 1 protein_coding Homo_sapiens
ENSMUSG00000032051 Fdx1 ferredoxin 1 protein_coding Mus_musculus

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