C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002C3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056410-ENSDARG00000089326 CGP 7955 9:30554004-30578028
GeneTranscriptPositionBiotype
ENSDARG00000056410 (fdx1)
ferredoxin 1
ENSDART00000078904 (fdx1-005) 30554093-30560325 nonsense_mediated_decay
ENSDART00000144430 (fdx1-002) 30554004-30560329 protein_coding
ENSDART00000147450 (fdx1-001) 30554050-30560329 nonsense_mediated_decay
ENSDART00000149927 (fdx1-004) 30554151-30566953 nonsense_mediated_decay
ENSDART00000150164 (fdx1-003) 30554093-30568761 processed_transcript
CIL_0002C3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137714-ENSG00000137727 CGP 9606 11:110429883-110713189
GeneTranscriptPositionBiotype
ENSG00000137714 (FDX1)
ferredoxin 1
ENST00000260270 (FDX1-001) 110429883-110464881 protein_coding
ENSG00000137727 (ARHGAP20)
Rho GTPase activating protein 20
ENST00000260283 (ARHGAP20-001) 110577042-110712728 protein_coding
ENST00000524756 (ARHGAP20-005) 110577054-110712050 protein_coding
ENST00000527598 (ARHGAP20-003) 110577054-110713189 protein_coding
ENST00000528829 (ARHGAP20-004) 110577054-110712728 protein_coding
ENST00000529591 (ARHGAP20-006) 110577043-110589685 protein_coding
ENST00000533353 (ARHGAP20-002) 110577054-110713189 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002C3_0001ENSDARG00000056410ENSDART00000078904ENSDART00000144430ENSDART00000147450ENSDART00000149927ENSDART00000150164CIL_0002C3_0002ENSG00000137714ENST00000260270ENSG00000137727ENST00000260283ENST00000524756ENST00000527598ENST00000528829ENST00000529591ENST00000533353
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002C3_0001ENSDARG00000056410ENSDART00000078904ENSDART00000144430ENSDART00000147450CIL_0002C3_0002ENSG00000137714ENST00000260270ENSG00000137727ENST00000260283ENST00000524756ENST00000527598ENST00000528829ENST00000529591
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056410 ENSDART00000078904 N/A N/A N/A N/A N/A N/A 14.913±5.67 16.599±0.00 3.559±0.00 N/A 2.605±0.00 N/A N/A N/A
ENSDART00000144430 N/A N/A N/A 21.257±16.34 N/A N/A 31.946±15.48 40.691±15.42 0.974±0.00 N/A 7.658±0.00 N/A N/A N/A
ENSDART00000147450 N/A N/A N/A N/A N/A N/A 15.727±12.94 17.287±9.85 N/A N/A N/A N/A N/A N/A
ENSDART00000149927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137714 ENST00000260270 3.960±0.00 5.182±0.00 3.318±0.00 3.600±0.64 4.056±1.97 3.359±1.17 4.254±1.74 8.729±1.66 7.591±3.48 3.368±2.23 2.972±1.50 10.757±8.15 12.760±2.69 4.928±1.02
ENSG00000137727 ENST00000260283 1.101±0.00 0.422±0.00 N/A 0.444±0.01 1.385±1.23 0.402±0.07 N/A N/A 2.004±0.00 0.465±0.30 N/A 0.359±0.09 0.295±0.00 0.763±0.12
ENST00000524756 0.622±0.00 0.578±0.00 N/A 0.472±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.00 N/A
ENST00000528829 N/A N/A 0.047±0.00 0.637±0.00 0.067±0.00 0.263±0.00 0.021±0.00 0.251±0.17 0.190±0.00 1.374±0.00 0.432±0.00 0.713±0.62 0.142±0.05 1.705±0.00
ENST00000529591 N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.104±0.00 0.038±0.00 N/A
ENST00000533353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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