C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeo box A1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000057721 hoxa1a 7955 + 19:19251862-19253497 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000080456 hoxa1a-002 19251958-19253142 protein_coding
  ENSDART00000080461 hoxa1a-001 19251862-19253497 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000080456ENSDART00000080461
Transcript ID Brain Heart Kidney Muscle
ENSDART00000080456 0.090±0.00 N/A N/A 0.084±0.00
ENSDART00000080461 0.392±0.30 0.131±0.00 0.615±0.40 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0006 UCNEbase 19:19094506-19320701

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000105991 HOXA1 homeobox A1 protein_coding Homo_sapiens
ENSMUSG00000029844 Hoxa1 homeobox A1 protein_coding Mus_musculus

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