C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nonhomologous end-joining factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000058893 nhej1 7955 - 6:7002704-7025878 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000081850 nhej1-201 7002711-7024683 protein_coding
  ENSDART00000148548 nhej1-001 7002704-7025878 protein_coding
  ENSDART00000148879 nhej1-002 7023632-7025461 retained_intron

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000081850ENSDART00000148548ENSDART00000148879
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000081850 1.234±1.48 1.853±0.24 4.610±1.30 0.322±0.00 2.250±0.00
ENSDART00000148548 1.343±0.27 N/A N/A N/A 0.371±0.00
ENSDART00000148879 N/A 0.454±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HY CIL_0001HY_0001 CGP 6:6976814-7025878

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000187736 NHEJ1 nonhomologous end-joining factor 1 protein_coding Homo_sapiens
ENSMUSG00000026162 Nhej1 nonhomologous end-joining factor 1 protein_coding Mus_musculus

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