C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syndecan 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000059906 sdc4 7955 - 6:52615763-52628296 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000083830 sdc4-001 52615763-52628296 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000083830
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000083830 7.301±0.54 25.959±5.08 24.032±5.75 18.523±0.00 23.730±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005546 IDA phosphatidylinositol-4,5-bisphosphate binding
GO:0005925 IDA focal adhesion
GO:0007155 IDA cell adhesion
GO:0008092 IEA cytoskeletal protein binding
GO:0016020 IEA membrane
GO:0016477 IDA cell migration
GO:0033627 IDA cell adhesion mediated by integrin
GO:0042060 IDA wound healing
GO:0043149 IDA stress fiber assembly
GO:0055113 IMP epiboly involved in gastrulation with mouth forming second

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000124145 SDC4 syndecan 4 protein_coding Homo_sapiens
ENSMUSG00000017009 Sdc4 syndecan 4 protein_coding Mus_musculus

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