C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SET domain containing 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000060030 setd1a 7955 + 3:32851133-32879554 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000083821 setd1a-201 32867066-32879544 protein_coding
  ENSDART00000125022 setd1a-202 32852112-32877867 protein_coding
  ENSDART00000131774 setd1a-001 32851133-32879554 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000083821ENSDART00000131774
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000083821 7.219±2.51 4.382±2.46 4.772±1.51 N/A 1.941±0.00
ENSDART00000131774 4.851±0.30 3.034±0.16 2.099±0.00 0.754±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044U CIL_00044U_0001 CGP 3:32851133-32915226

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0008168 IEA methyltransferase activity
GO:0016740 IEA transferase activity
GO:0018024 IEA histone-lysine N-methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000099381 SETD1A SET domain containing 1A protein_coding Homo_sapiens
ENSMUSG00000042308 Setd1a SET domain containing 1A protein_coding Mus_musculus

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