C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeo box C3a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000070339 hoxc3a 7955 + 23:36138763-36200915 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000082472 hoxc3a-201 36174184-36200585 protein_coding
  ENSDART00000082473 hoxc3a-001 36196031-36200915 protein_coding
  ENSDART00000128533 hoxc3a-003 36158334-36197174 protein_coding
  ENSDART00000137507 hoxc3a-002 36160997-36196870 retained_intron
  ENSDART00000154825 hoxc3a-004 36138763-36199592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000082472ENSDART00000082473ENSDART00000128533ENSDART00000137507ENSDART00000154825
Transcript ID Brain Heart Kidney Muscle
ENSDART00000082472 0.105±0.09 0.270±0.18 3.004±1.61 N/A
ENSDART00000082473 0.045±0.01 N/A 0.410±0.00 0.583±0.00
ENSDART00000128533 N/A 0.133±0.00 N/A N/A
ENSDART00000137507 N/A 0.679±0.00 N/A N/A
ENSDART00000154825 0.142±0.07 N/A 1.428±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

No Homologs available.

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