C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: homeo box C3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000082473 hoxc3a-001 ENSDARG00000070339 7955 + 23:36196031-36200915 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleENSDART00000082473
Transcript ID Brain Kidney Muscle
ENSDART00000082473 0.045±0.01 0.410±0.00 0.583±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085591 Pdx1-001 protein_coding Mus_musculus 0.000006 58
ENST00000303406 HOXC4-001 protein_coding Homo_sapiens 0.000000000006 77
ENST00000430889 HOXC4-003 protein_coding Homo_sapiens 0.000000000006 77

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