C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Hermansky-Pudlak syndrome 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000071062 hps5 7955 - 25:3115128-3159121 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000104832 hps5-201 3115138-3159121 protein_coding
  ENSDART00000104835 hps5-001 3115128-3159102 protein_coding
  ENSDART00000148696 hps5-002 3156164-3159094 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000104832ENSDART00000104835
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000104832 0.398±0.23 7.071±5.20 15.287±4.11 N/A 1.104±0.00
ENSDART00000104835 0.594±0.38 2.431±0.64 2.665±0.00 0.703±0.00 2.833±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041D CIL_00041D_0001 CGP 25:3115128-3183812

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000110756 HPS5 Hermansky-Pudlak syndrome 5 protein_coding Homo_sapiens
ENSMUSG00000014418 Hps5 Hermansky-Pudlak syndrome 5 homolog (human) protein_coding Mus_musculus

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