C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000073721 SMARCAD1 (2 of 2) 7955 - 10:17582953-17618052 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000113101 SMARCAD1 (2 of 2)-001 17582953-17618052 protein_coding
  ENSDART00000139113 SMARCAD1 (2 of 2)-002 17593195-17600372 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000113101
Transcript ID Brain Heart Kidney Muscle
ENSDART00000113101 2.818±0.56 0.772±0.44 3.135±1.65 0.237±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000729 ISS DNA double-strand break processing
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006281 IEA DNA repair
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0016568 IEA chromatin modification
GO:0016787 IEA hydrolase activity
GO:0035861 ISS site of double-strand break
GO:0043044 ISS ATP-dependent chromatin remodeling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163104 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein_coding Homo_sapiens
ENSMUSG00000029920 Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein_coding Mus_musculus

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