C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SERPINE1 mRNA binding protein 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000074242 serbp1a 7955 + 6:34886165-34893314 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000113814 serbp1a-201 34886217-34893313 protein_coding
  ENSDART00000131610 serbp1a-001 34886165-34893314 protein_coding
  ENSDART00000133453 serbp1a-003 34886204-34892288 processed_transcript
  ENSDART00000135425 serbp1a-005 34886225-34891325 processed_transcript
  ENSDART00000140147 serbp1a-004 34886218-34891955 processed_transcript
  ENSDART00000140334 serbp1a-002 34886218-34892961 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000113814ENSDART00000131610ENSDART00000133453ENSDART00000140147ENSDART00000140334
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000113814 44.045±1.27 6.500±0.62 9.556±1.64 N/A N/A
ENSDART00000131610 5.456±2.14 13.091±6.15 10.848±0.00 16.928±0.00 19.494±0.00
ENSDART00000133453 N/A 10.676±0.00 N/A N/A N/A
ENSDART00000140147 2.889±0.00 13.458±0.00 7.976±0.00 N/A N/A
ENSDART00000140334 N/A 4.229±1.59 6.924±0.74 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QS CIL_0004QS_0001 CGP 6:34886165-34916314

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003730 IEA mRNA 3'-UTR binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000142864 SERBP1 SERPINE1 mRNA binding protein 1 protein_coding Homo_sapiens
ENSMUSG00000036371 Serbp1 serpine1 mRNA binding protein 1 protein_coding Mus_musculus

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