C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SERPINE1 mRNA binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000142864 SERBP1 9606 - 1:67407810-67430415 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361219 SERBP1-005 67412385-67430399 protein_coding
  ENST00000370990 SERBP1-006 67412867-67430372 protein_coding
  ENST00000370994 SERBP1-001 67407810-67430415 protein_coding
  ENST00000370995 SERBP1-002 67411038-67430386 protein_coding
  ENST00000462814 SERBP1-004 67415273-67420565 processed_transcript
  ENST00000484880 SERBP1-007 67419765-67425120 processed_transcript
  ENST00000490406 SERBP1-003 67424285-67429657 processed_transcript
  ENST00000493607 SERBP1-008 67413216-67424414 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361219ENST00000370990ENST00000370994ENST00000370995ENST00000484880
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361219 9.945±0.00 N/A N/A N/A 3.793±0.00 5.755±0.00 N/A 12.479±0.00 N/A N/A N/A 12.350±4.53 25.566±0.00 33.227±0.00
ENST00000370990 17.236±0.00 23.597±0.00 N/A 11.512±0.00 N/A 28.719±0.00 N/A N/A 13.807±0.00 19.257±0.00 20.688±0.00 30.057±8.16 31.663±5.23 35.952±11.03
ENST00000370994 5.745±0.00 6.331±0.00 2.911±0.00 2.286±0.35 5.496±0.50 7.183±1.13 3.192±0.95 6.780±0.73 3.915±1.52 4.655±0.29 2.993±0.77 5.954±1.03 2.891±0.00 7.260±0.00
ENST00000370995 20.016±0.00 19.220±0.00 N/A 8.002±4.39 12.974±9.96 27.702±0.00 11.205±8.37 16.710±9.99 7.313±0.00 13.118±6.52 10.872±4.56 15.658±8.00 N/A 30.167±0.00
ENST00000484880 N/A N/A 25.609±0.00 13.743±0.00 17.049±0.00 21.441±0.00 N/A 20.745±0.00 24.432±0.00 21.158±0.00 N/A 52.799±36.08 99.941±0.00 136.220±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003730 IDA mRNA 3'-UTR binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0016020 IDA membrane
GO:0042981 IEA regulation of apoptotic process
GO:0043488 NAS regulation of mRNA stability
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074242 serbp1a SERPINE1 mRNA binding protein 1a protein_coding Danio_rerio
ENSDARG00000074580 serbp1a SERPINE1 mRNA binding protein 1a protein_coding Danio_rerio
ENSDARG00000087421 SERBP1 (3 of 3) SERPINE1 mRNA binding protein 1 protein_coding Danio_rerio
ENSMUSG00000036371 Serbp1 serpine1 mRNA binding protein 1 protein_coding Mus_musculus

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