C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GAR1 ribonucleoprotein homolog (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000076526 gar1 7955 - 14:45847308-45859860 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000111189 gar1-001 45847308-45859860 protein_coding
  ENSDART00000122339 gar1-201 45853333-45859860 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000111189ENSDART00000122339
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000111189 3.521±0.96 3.751±3.38 9.549±8.44 4.472±0.00 3.232±0.00
ENSDART00000122339 2.364±0.66 5.567±2.53 17.545±0.00 5.931±0.00 1.508±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006364 IMP rRNA processing
GO:0030529 IEA ribonucleoprotein complex
GO:0031429 IEA box H/ACA snoRNP complex
GO:0042254 IEA ribosome biogenesis
GO:0060216 IGI definitive hemopoiesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000109534 GAR1 GAR1 ribonucleoprotein protein_coding Homo_sapiens
ENSMUSG00000028010 Gar1 GAR1 ribonucleoprotein homolog (yeast) protein_coding Mus_musculus

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