C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycerophosphodiester phosphodiesterase domain containing 5b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000076962 gdpd5b 7955 + 15:28737004-28833611 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000112375 gdpd5b-201 28770748-28833611 protein_coding
  ENSDART00000154343 gdpd5b-005 28821159-28830983 protein_coding
  ENSDART00000154790 gdpd5b-001 28742733-28833606 nonsense_mediated_decay
  ENSDART00000155198 gdpd5b-002 28742874-28758946 processed_transcript
  ENSDART00000155417 gdpd5b-003 28737004-28803121 nonsense_mediated_decay
  ENSDART00000156497 gdpd5b-004 28742849-28770892 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000112375ENSDART00000154343ENSDART00000154790
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000112375 6.766±3.18 7.209±3.50 N/A 0.257±0.00 0.516±0.00
ENSDART00000154343 N/A N/A N/A N/A 1.148±0.00
ENSDART00000154790 N/A 1.599±0.00 3.668±0.00 0.198±0.00 0.421±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZX CIL_0002ZX_0001 CGP 15:28732298-28833611

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006071 IEA glycerol metabolic process
GO:0006629 IEA lipid metabolic process
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0008889 IEA glycerophosphodiester phosphodiesterase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000158555 GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 protein_coding Homo_sapiens
ENSMUSG00000035314 Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 protein_coding Mus_musculus

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