C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 4A, isoform 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000092115 eif4a1a 7955 - 7:27636641-27654442 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000058913 eif4a1a-001 27636695-27643954 protein_coding
  ENSDART00000122335 eif4a1a-201 27636641-27654442 protein_coding
  ENSDART00000140694 eif4a1a-002 27640716-27643927 retained_intron
  ENSDART00000142772 eif4a1a-004 27638403-27639929 retained_intron
  ENSDART00000146681 eif4a1a-003 27637736-27639761 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000058913ENSDART00000122335
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000058913 74.011±10.94 91.476±57.35 76.205±62.16 60.307±0.00 51.522±0.00
ENSDART00000122335 4.850±0.00 N/A 8.317±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037A CIL_00037A_0001 CGP 7:27636641-27657933

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003743 IEA translation initiation factor activity
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0006412 IEA translation
GO:0006413 IEA translational initiation
GO:0006508 IEA proteolysis
GO:0008026 IEA ATP-dependent helicase activity
GO:0008234 IEA cysteine-type peptidase activity
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000161956 SENP3 SUMO1/sentrin/SMT3 specific peptidase 3 protein_coding Homo_sapiens
ENSG00000277957 SENP3-EIF4A1 SENP3-EIF4A1 readthrough (NMD candidate) protein_coding Homo_sapiens
ENSMUSG00000005204 Senp3 SUMO/sentrin specific peptidase 3 protein_coding Mus_musculus

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