C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mannose-6-phosphate receptor (cation dependent)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000003056 M6PR 9606 - 12:8940363-8949955 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000000412 M6PR-001 8940365-8949955 protein_coding
  ENST00000536844 M6PR-201 8940364-8949761 protein_coding
  ENST00000537621 M6PR-009 8942179-8943886 protein_coding
  ENST00000539143 M6PR-010 8940363-8943420 protein_coding
  ENST00000540837 M6PR-006 8945237-8949610 retained_intron
  ENST00000541507 M6PR-002 8940363-8949636 nonsense_mediated_decay
  ENST00000543159 M6PR-005 8945485-8946848 protein_coding
  ENST00000543258 M6PR-007 8942451-8946240 nonsense_mediated_decay
  ENST00000543704 M6PR-011 8941649-8946368 protein_coding
  ENST00000543834 M6PR-008 8943296-8945479 retained_intron
  ENST00000543845 M6PR-004 8945433-8949645 protein_coding
  ENST00000544193 M6PR-012 8940751-8942517 protein_coding
  ENST00000544245 M6PR-003 8943825-8949735 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000000412ENST00000536844ENST00000541507ENST00000544245
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000000412 13.396±0.00 9.027±0.00 8.047±0.00 11.783±1.39 17.844±1.41 10.604±1.24 11.570±4.15 18.915±9.20 15.220±2.46 17.783±3.40 11.140±0.00 29.883±6.33 25.732±1.55 24.194±0.00
ENST00000536844 9.098±0.00 21.204±0.00 N/A 7.043±0.00 7.341±0.00 16.099±0.00 6.901±0.00 9.331±0.00 4.913±0.00 N/A 5.642±0.00 16.941±0.00 14.294±0.00 15.172±1.16
ENST00000541507 N/A N/A N/A N/A N/A 3.677±0.00 N/A N/A N/A 10.518±0.00 3.100±0.00 24.323±9.62 14.149±4.94 14.703±0.00
ENST00000544245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.419±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HL CIL_0008HL_0001 VISTA 12:8543390-9149656

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000323 IEA lytic vacuole
GO:0004888 TAS transmembrane signaling receptor activity
GO:0005537 IEA mannose binding
GO:0005764 IEA lysosome
GO:0005768 IDA endosome
GO:0005770 IEA late endosome
GO:0005887 TAS integral component of plasma membrane
GO:0006898 TAS receptor-mediated endocytosis
GO:0007165 TAS signal transduction
GO:0008333 TAS endosome to lysosome transport
GO:0015578 IEA mannose transmembrane transporter activity
GO:0015761 IEA mannose transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018432 m6pr mannose-6-phosphate receptor (cation dependent) protein_coding Danio_rerio
ENSMUSG00000007458 M6pr mannose-6-phosphate receptor, cation dependent protein_coding Mus_musculus

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