C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mannose-6-phosphate receptor (cation dependent)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000000412 M6PR-001 ENSG00000003056 9606 - 12:8940365-8949955 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000000412
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000000412 13.396±0.00 9.027±0.00 8.047±0.00 11.783±1.39 17.844±1.41 10.604±1.24 11.570±4.15 18.915±9.20 15.220±2.46 17.783±3.40 11.140±0.00 29.883±6.33 25.732±1.55 24.194±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HL CIL_0008HL_0001 VISTA 12:8543390-9149656

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000323 IEA lytic vacuole
GO:0004888 TAS transmembrane signaling receptor activity
GO:0005537 IEA mannose binding
GO:0005764 IEA lysosome
GO:0005768 IDA endosome
GO:0005770 IEA late endosome
GO:0005887 TAS integral component of plasma membrane
GO:0006898 TAS receptor-mediated endocytosis
GO:0007165 TAS signal transduction
GO:0008333 TAS endosome to lysosome transport
GO:0015578 IEA mannose transmembrane transporter activity
GO:0015761 IEA mannose transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007602 M6pr-001 protein_coding Mus_musculus 0 1170
ENSMUST00000112610 M6pr-002 protein_coding Mus_musculus 0 1096
ENSMUST00000120481 M6pr-ps-001 processed_pseudogene Mus_musculus 0 941
ENSMUST00000123093 M6pr-003 retained_intron Mus_musculus 0 741

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