C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thrombospondin, type I, domain containing 7A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000005108 THSD7A 9606 - 7:11370357-11832198 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000408005 THSD7A-004 11374620-11379755 retained_intron
  ENST00000423059 THSD7A-001 11370357-11832198 protein_coding
  ENST00000480061 THSD7A-002 11636612-11751353 processed_transcript
  ENST00000497575 THSD7A-003 11446302-11543059 processed_transcript
  ENST00000617773 THSD7A-201 11370437-11832198 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000423059ENST00000480061ENST00000497575ENST00000617773
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000423059 0.435±0.00 0.964±0.00 2.320±0.00 1.569±0.32 N/A 0.879±0.00 N/A 1.912±0.00 0.266±0.11 N/A 0.137±0.00 0.171±0.02 0.873±0.12 0.261±0.12
ENST00000480061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.330±0.00 N/A N/A N/A
ENST00000497575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.013±0.00 N/A N/A N/A
ENST00000617773 0.688±0.00 N/A N/A N/A 0.246±0.08 0.499±0.00 0.285±0.00 0.422±0.12 N/A 0.258±0.00 0.115±0.00 0.236±0.19 1.783±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022R CIL_00022R_0001 CGP 7:11370357-12243367

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061479 thsd7a thrombospondin, type I, domain containing 7A protein_coding Danio_rerio
ENSDARG00000090496 THSD7A (2 of 2) thrombospondin, type I, domain containing 7A protein_coding Danio_rerio
ENSMUSG00000032625 Thsd7a thrombospondin, type I, domain containing 7A protein_coding Mus_musculus

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