C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thrombospondin, type I, domain containing 7A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032625 Thsd7a 10090 - 6:12311610-12749410 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046121 Thsd7a-201 12311610-12749253 protein_coding
  ENSMUST00000119443 Thsd7a-002 12465280-12555113 protein_coding
  ENSMUST00000119581 Thsd7a-001 12317087-12749410 protein_coding
  ENSMUST00000122369 Thsd7a-003 12317349-12419361 protein_coding
  ENSMUST00000135450 Thsd7a-005 12320802-12324693 retained_intron
  ENSMUST00000137836 Thsd7a-004 12317127-12318329 retained_intron
  ENSMUST00000172356 Thsd7a-202 12311610-12749253 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046121ENSMUST00000119581ENSMUST00000122369ENSMUST00000135450ENSMUST00000172356
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046121 0.873±0.09 0.499±0.07 0.850±0.03 4.564±2.48 0.343±0.09 0.277±0.05 0.529±0.09 1.292±0.07 0.047±0.02 0.323±0.07 0.062±0.03 0.246±0.13 0.090±0.04 0.127±0.02
ENSMUST00000119581 0.386±0.12 1.028±0.14 N/A N/A 0.328±0.13 0.343±0.07 0.175±0.00 0.373±0.05 0.029±0.01 N/A 0.054±0.02 0.788±0.16 0.351±0.30 0.077±0.00
ENSMUST00000122369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.02 N/A N/A 0.653±0.19
ENSMUST00000135450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.655±0.00 2.539±0.00 N/A N/A
ENSMUST00000172356 N/A 0.595±0.30 N/A N/A 0.223±0.02 N/A N/A N/A 0.031±0.01 N/A 0.051±0.02 0.135±0.04 0.095±0.02 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022R CIL_00022R_0002 CGP 6:12311610-13089269

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061479 thsd7a thrombospondin, type I, domain containing 7A protein_coding Danio_rerio
ENSDARG00000090496 THSD7A (2 of 2) thrombospondin, type I, domain containing 7A protein_coding Danio_rerio
ENSG00000005108 THSD7A thrombospondin, type I, domain containing 7A protein_coding Homo_sapiens

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