C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-CoA synthetase medium-chain family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000005187 ACSM3 9606 + 16:20610243-20797581 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000289416 ACSM3-001 20763702-20797581 protein_coding
  ENST00000440284 ACSM3-002 20764040-20786314 protein_coding
  ENST00000501740 ACSM3-013 20674510-20755608 processed_transcript
  ENST00000561499 ACSM3-008 20783264-20786152 processed_transcript
  ENST00000561584 ACSM3-014 20674608-20770191 protein_coding
  ENST00000561795 ACSM3-004 20764683-20777417 protein_coding
  ENST00000562251 ACSM3-003 20770160-20797156 protein_coding
  ENST00000563914 ACSM3-009 20779881-20786316 protein_coding
  ENST00000564701 ACSM3-011 20749418-20770109 protein_coding
  ENST00000567006 ACSM3-007 20796238-20797153 retained_intron
  ENST00000567387 ACSM3-005 20783251-20796992 processed_transcript
  ENST00000567711 ACSM3-010 20796078-20797156 processed_transcript
  ENST00000568235 ACSM3-012 20610243-20775920 protein_coding
  ENST00000569141 ACSM3-006 20785050-20796929 protein_coding
  ENST00000614721 ACSM3-015 20674531-20682176 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartKidneyOvaryENST00000289416ENST00000440284ENST00000567387ENST00000614721
Transcript ID Bladder Heart Kidney Ovary
ENST00000289416 3.659±0.00 N/A N/A N/A
ENST00000440284 N/A N/A 14.545±2.48 N/A
ENST00000567387 N/A N/A 16.110±0.00 N/A
ENST00000614721 N/A 1.442±0.00 N/A 27.717±10.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003824 IEA catalytic activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005739 IEA mitochondrion
GO:0005759 IEA mitochondrial matrix
GO:0006633 IEA fatty acid biosynthetic process
GO:0008152 IEA metabolic process
GO:0008217 NAS regulation of blood pressure
GO:0015645 IEA fatty acid ligase activity
GO:0042632 NAS cholesterol homeostasis
GO:0046872 IEA metal ion binding
GO:0047760 IEA butyrate-CoA ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004880 acsm3 acyl-CoA synthetase medium-chain family member 3 protein_coding Danio_rerio
ENSMUSG00000030935 Acsm3 acyl-CoA synthetase medium-chain family member 3 protein_coding Mus_musculus

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